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<a href="default_user_functions_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="preprocessor">#ifndef defaultUserFunctions_h</span></div>
<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="preprocessor"></span><span class="preprocessor">#define defaultUserFunctions_h</span></div>
<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160;<span class="preprocessor"></span></div>
<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="comment">//extern &quot;C&quot; {</span></div>
<div class="line"><a name="l00005"></a><span class="lineno">    5</span>&#160;<span class="preprocessor">#include &quot;petiga.h&quot;</span></div>
<div class="line"><a name="l00006"></a><span class="lineno">    6</span>&#160;<span class="comment">//}</span></div>
<div class="line"><a name="l00007"></a><span class="lineno">    7</span>&#160;</div>
<div class="line"><a name="l00008"></a><span class="lineno">    8</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="tensor_8h.html">tensor.h</a>&quot;</span></div>
<div class="line"><a name="l00009"></a><span class="lineno">    9</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="solution_class_8h.html">solutionClass.h</a>&quot;</span></div>
<div class="line"><a name="l00010"></a><span class="lineno">   10</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="test_function_class_8h.html">testFunctionClass.h</a>&quot;</span></div>
<div class="line"><a name="l00011"></a><span class="lineno">   11</span>&#160;<span class="preprocessor">#include &quot;<a class="code" href="app_ctx_8h.html">appCtx.h</a>&quot;</span></div>
<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;</div>
<div class="line"><a name="l00013"></a><span class="lineno">   13</span>&#160;<span class="comment">//include automatic differentiation library</span></div>
<div class="line"><a name="l00014"></a><span class="lineno">   14</span>&#160;<span class="preprocessor">#include &lt;Sacado.hpp&gt;</span></div>
<div class="line"><a name="l00015"></a><span class="lineno">   15</span>&#160;<span class="comment">//#include &lt;Sacado_Fad_BLAS.hpp&gt;</span></div>
<div class="line"><a name="l00016"></a><span class="lineno">   16</span>&#160;<span class="preprocessor">#include &lt;Sacado_Fad_SimpleFad.hpp&gt;</span></div>
<div class="line"><a name="l00017"></a><span class="lineno">   17</span>&#160;</div>
<div class="line"><a name="l00018"></a><span class="lineno">   18</span>&#160;<span class="comment"></span></div>
<div class="line"><a name="l00019"></a><span class="lineno">   19</span>&#160;<span class="comment">/**</span></div>
<div class="line"><a name="l00020"></a><span class="lineno">   20</span>&#160;<span class="comment"> * @ingroup userFunctions</span></div>
<div class="line"><a name="l00021"></a><span class="lineno">   21</span>&#160;<span class="comment"> * Define the initial conditions of the IBVP for scalar fields. </span></div>
<div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;<span class="comment"> * Return the initial value for scalar solution field with label scalar_i for the node located at the point x.</span></div>
<div class="line"><a name="l00023"></a><span class="lineno">   23</span>&#160;<span class="comment"> *</span></div>
<div class="line"><a name="l00024"></a><span class="lineno">   24</span>&#160;<span class="comment"> * Defaults to a zero initial condition.</span></div>
<div class="line"><a name="l00025"></a><span class="lineno">   25</span>&#160;<span class="comment"> */</span></div>
<div class="line"><a name="l00026"></a><span class="lineno">   26</span>&#160;</div>
<div class="line"><a name="l00027"></a><span class="lineno">   27</span>&#160;<span class="keyword">template</span>&lt;<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> dim&gt;</div>
<div class="line"><a name="l00028"></a><span class="lineno"><a class="line" href="group__user_functions.html#ga4bb6b6363788ea6d3af2c543955ee029">   28</a></span>&#160;<span class="keywordtype">double</span> <a class="code" href="group__user_functions.html#ga4bb6b6363788ea6d3af2c543955ee029">scalarInitialConditions</a>(<span class="keyword">const</span> <a class="code" href="class_tensor.html">Tensor&lt;1,dim,double&gt;</a> &amp;x, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> scalar_i, <a class="code" href="struct_app_ctx.html">AppCtx&lt;dim&gt;</a> &amp;user){</div>
<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;  <span class="keywordflow">return</span> 0;</div>
<div class="line"><a name="l00030"></a><span class="lineno">   30</span>&#160;}</div>
<div class="line"><a name="l00031"></a><span class="lineno">   31</span>&#160;<span class="comment"></span></div>
<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;<span class="comment">/**</span></div>
<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;<span class="comment"> * @ingroup userFunctions</span></div>
<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160;<span class="comment"> * Define the initial conditions of the IBVP for vector fields.</span></div>
<div class="line"><a name="l00035"></a><span class="lineno">   35</span>&#160;<span class="comment"> * Return the initial value (1st order tensor) for vector solution field with label vector_i for the node located at the point x.</span></div>
<div class="line"><a name="l00036"></a><span class="lineno">   36</span>&#160;<span class="comment"> *</span></div>
<div class="line"><a name="l00037"></a><span class="lineno">   37</span>&#160;<span class="comment"> * Defaults to a zero initial condition.</span></div>
<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;<span class="comment"> */</span></div>
<div class="line"><a name="l00039"></a><span class="lineno">   39</span>&#160;</div>
<div class="line"><a name="l00040"></a><span class="lineno">   40</span>&#160;<span class="keyword">template</span>&lt;<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> dim&gt;</div>
<div class="line"><a name="l00041"></a><span class="lineno"><a class="line" href="group__user_functions.html#gac3c9dadedbc328dc0a3006f072b08a55">   41</a></span>&#160;<a class="code" href="class_tensor.html">Tensor&lt;1,dim,double&gt;</a> <a class="code" href="group__user_functions.html#gac3c9dadedbc328dc0a3006f072b08a55">vectorInitialConditions</a>(<span class="keyword">const</span> <a class="code" href="class_tensor.html">Tensor&lt;1,dim,double&gt;</a> &amp;x, <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> vector_i, <a class="code" href="struct_app_ctx.html">AppCtx&lt;dim&gt;</a> &amp;user){</div>
<div class="line"><a name="l00042"></a><span class="lineno">   42</span>&#160;  <a class="code" href="class_tensor.html">Tensor&lt;1,dim,double&gt;</a> tmp;</div>
<div class="line"><a name="l00043"></a><span class="lineno">   43</span>&#160;  <span class="keywordflow">return</span> tmp;</div>
<div class="line"><a name="l00044"></a><span class="lineno">   44</span>&#160;};</div>
<div class="line"><a name="l00045"></a><span class="lineno">   45</span>&#160;<span class="comment"></span></div>
<div class="line"><a name="l00046"></a><span class="lineno">   46</span>&#160;<span class="comment">/**</span></div>
<div class="line"><a name="l00047"></a><span class="lineno">   47</span>&#160;<span class="comment"> * @ingroup userFunctions</span></div>
<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;<span class="comment"> * Define the Dirichlet boundary conditions using PetIGA&#39;s function. This function defines a uniform value for a given</span></div>
<div class="line"><a name="l00049"></a><span class="lineno">   49</span>&#160;<span class="comment"> * solution field on a face, using the following notation:</span></div>
<div class="line"><a name="l00050"></a><span class="lineno">   50</span>&#160;<span class="comment"> *</span></div>
<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;<span class="comment"> * IGASetBoundaryValue(user.iga,&quot;axis (0,1,2)&quot;,&quot;boundary (0,1)&quot;,&quot;dof_index&quot;,&quot;value&quot;)</span></div>
<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160;<span class="comment"> *</span></div>
<div class="line"><a name="l00053"></a><span class="lineno">   53</span>&#160;<span class="comment"> * Potentially called multiple times. The input scale can be used to scale the value of the boundary condition</span></div>
<div class="line"><a name="l00054"></a><span class="lineno">   54</span>&#160;<span class="comment"> * if load stepping is being used.</span></div>
<div class="line"><a name="l00055"></a><span class="lineno">   55</span>&#160;<span class="comment"> *</span></div>
<div class="line"><a name="l00056"></a><span class="lineno">   56</span>&#160;<span class="comment"> * Defaults to no Dirichlet boundary conditions.</span></div>
<div class="line"><a name="l00057"></a><span class="lineno">   57</span>&#160;<span class="comment"> */</span></div>
<div class="line"><a name="l00058"></a><span class="lineno">   58</span>&#160;</div>
<div class="line"><a name="l00059"></a><span class="lineno">   59</span>&#160;<span class="keyword">template</span>&lt;<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> dim&gt;</div>
<div class="line"><a name="l00060"></a><span class="lineno"><a class="line" href="group__user_functions.html#gacaf804e621998c5c9794a46d3212afbb">   60</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="group__user_functions.html#gacaf804e621998c5c9794a46d3212afbb">boundaryConditions</a>(<a class="code" href="struct_app_ctx.html">AppCtx&lt;dim&gt;</a>&amp; user, <span class="keywordtype">double</span> scale){};</div>
<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160;<span class="comment"></span></div>
<div class="line"><a name="l00062"></a><span class="lineno">   62</span>&#160;<span class="comment">/**</span></div>
<div class="line"><a name="l00063"></a><span class="lineno">   63</span>&#160;<span class="comment"> * @ingroup userFunctions</span></div>
<div class="line"><a name="l00064"></a><span class="lineno">   64</span>&#160;<span class="comment"> * Define any load stepping (i.e. change in Dirichlet b.c.s). Called at each time/load step. This would usually</span></div>
<div class="line"><a name="l00065"></a><span class="lineno">   65</span>&#160;<span class="comment"> * involve calling the boundaryConditions function with an adjusted value for the input scale.</span></div>
<div class="line"><a name="l00066"></a><span class="lineno">   66</span>&#160;<span class="comment"> *</span></div>
<div class="line"><a name="l00067"></a><span class="lineno">   67</span>&#160;<span class="comment"> * Defaults to no load stepping.</span></div>
<div class="line"><a name="l00068"></a><span class="lineno">   68</span>&#160;<span class="comment"> */</span></div>
<div class="line"><a name="l00069"></a><span class="lineno">   69</span>&#160;</div>
<div class="line"><a name="l00070"></a><span class="lineno">   70</span>&#160;<span class="keyword">template</span>&lt;<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> dim&gt;</div>
<div class="line"><a name="l00071"></a><span class="lineno"><a class="line" href="group__user_functions.html#ga397c8fb1bf91992fb38944806aa864cf">   71</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="group__user_functions.html#ga397c8fb1bf91992fb38944806aa864cf">loadStep</a>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> step,<a class="code" href="struct_app_ctx.html">AppCtx&lt;dim&gt;</a> &amp;user){};</div>
<div class="line"><a name="l00072"></a><span class="lineno">   72</span>&#160;<span class="comment"></span></div>
<div class="line"><a name="l00073"></a><span class="lineno">   73</span>&#160;<span class="comment">/**</span></div>
<div class="line"><a name="l00074"></a><span class="lineno">   74</span>&#160;<span class="comment"> * @ingroup userFunctions</span></div>
<div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160;<span class="comment"> * Specify any adaptive time step schemes (i.e. change the value of dt based on current conditions). Called at each time/load step.</span></div>
<div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160;<span class="comment"> *</span></div>
<div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160;<span class="comment"> * Defaults to no adaptive time stepping.</span></div>
<div class="line"><a name="l00078"></a><span class="lineno">   78</span>&#160;<span class="comment"> */</span></div>
<div class="line"><a name="l00079"></a><span class="lineno">   79</span>&#160;</div>
<div class="line"><a name="l00080"></a><span class="lineno">   80</span>&#160;<span class="keyword">template</span>&lt;<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> dim&gt;</div>
<div class="line"><a name="l00081"></a><span class="lineno"><a class="line" href="group__user_functions.html#gae605154e592215f58a1b4c68396db2d0">   81</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="group__user_functions.html#gae605154e592215f58a1b4c68396db2d0">adaptiveTimeStep</a>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> step,<a class="code" href="struct_app_ctx.html">AppCtx&lt;dim&gt;</a> &amp;user){};</div>
<div class="line"><a name="l00082"></a><span class="lineno">   82</span>&#160;<span class="comment"></span></div>
<div class="line"><a name="l00083"></a><span class="lineno">   83</span>&#160;<span class="comment">/**</span></div>
<div class="line"><a name="l00084"></a><span class="lineno">   84</span>&#160;<span class="comment"> * @ingroup userFunctions</span></div>
<div class="line"><a name="l00085"></a><span class="lineno">   85</span>&#160;<span class="comment"> * Function defining the scalar and vector fields (defined at the quadrature point) to be projected to the nodes </span></div>
<div class="line"><a name="l00086"></a><span class="lineno">   86</span>&#160;<span class="comment"> * and included in the output file.</span></div>
<div class="line"><a name="l00087"></a><span class="lineno">   87</span>&#160;<span class="comment"> *</span></div>
<div class="line"><a name="l00088"></a><span class="lineno">   88</span>&#160;<span class="comment"> * @param x gives the coordinates of the quadrature point.</span></div>
<div class="line"><a name="l00089"></a><span class="lineno">   89</span>&#160;<span class="comment"> * @param normal gives the unit normal for a surface quadrature point.</span></div>
<div class="line"><a name="l00090"></a><span class="lineno">   90</span>&#160;<span class="comment"> * @param c gives the information (values, gradients, etc.) for the scalar solution fields at the current quadrature point</span></div>
<div class="line"><a name="l00091"></a><span class="lineno">   91</span>&#160;<span class="comment"> * (see documentation for solutionScalars class).</span></div>
<div class="line"><a name="l00092"></a><span class="lineno">   92</span>&#160;<span class="comment"> * @param u gives the information (values, gradients, etc.) for the vector solution fields at the current quadrature point</span></div>
<div class="line"><a name="l00093"></a><span class="lineno">   93</span>&#160;<span class="comment"> * (see documentation for solutionVectors class).</span></div>
<div class="line"><a name="l00094"></a><span class="lineno">   94</span>&#160;<span class="comment"> * @param user is a structure available for parameters related to the initial boundary value problem (e.g. elasticity tensor).</span></div>
<div class="line"><a name="l00095"></a><span class="lineno">   95</span>&#160;<span class="comment"> * @param scalarProjections stores the scalar values calculated at the quadrature points that are to be projected to the nodes.</span></div>
<div class="line"><a name="l00096"></a><span class="lineno">   96</span>&#160;<span class="comment"> * @param vectorProjectionsvector stores the vector values calculated at the quadrature points that are to be projected to the nodes.</span></div>
<div class="line"><a name="l00097"></a><span class="lineno">   97</span>&#160;<span class="comment"> *</span></div>
<div class="line"><a name="l00098"></a><span class="lineno">   98</span>&#160;<span class="comment"> * The stored values and location in the \c scalarProjections and \c vectorProjectionsvector vectors should correspond</span></div>
<div class="line"><a name="l00099"></a><span class="lineno">   99</span>&#160;<span class="comment"> * the name and location defined in the defineParameters function.</span></div>
<div class="line"><a name="l00100"></a><span class="lineno">  100</span>&#160;<span class="comment"> *</span></div>
<div class="line"><a name="l00101"></a><span class="lineno">  101</span>&#160;<span class="comment"> * Defaults to zero valued fields.</span></div>
<div class="line"><a name="l00102"></a><span class="lineno">  102</span>&#160;<span class="comment"> */</span></div>
<div class="line"><a name="l00103"></a><span class="lineno">  103</span>&#160;</div>
<div class="line"><a name="l00104"></a><span class="lineno">  104</span>&#160;<span class="keyword">template</span>&lt;<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> dim&gt;</div>
<div class="line"><a name="l00105"></a><span class="lineno"><a class="line" href="group__user_functions.html#ga31a2f2e526abaf0b8a00c2623e14f22e">  105</a></span>&#160;<span class="keywordtype">void</span> <a class="code" href="group__user_functions.html#ga31a2f2e526abaf0b8a00c2623e14f22e">projectFields</a>(<span class="keyword">const</span> <a class="code" href="class_tensor.html">Tensor&lt;1,dim,double&gt;</a> &amp;x,</div>
<div class="line"><a name="l00106"></a><span class="lineno">  106</span>&#160;              <span class="keyword">const</span> <a class="code" href="class_tensor.html">Tensor&lt;1,dim,double&gt;</a> &amp;normal,</div>
<div class="line"><a name="l00107"></a><span class="lineno">  107</span>&#160;              <span class="keyword">const</span> <a class="code" href="classsolution_scalars.html">solutionScalars&lt;dim,double&gt;</a> &amp;c,</div>
<div class="line"><a name="l00108"></a><span class="lineno">  108</span>&#160;              <span class="keyword">const</span> <a class="code" href="classsolution_vectors.html">solutionVectors&lt;dim,double&gt;</a> &amp;u,</div>
<div class="line"><a name="l00109"></a><span class="lineno">  109</span>&#160;              <a class="code" href="struct_app_ctx.html">AppCtx&lt;dim&gt;</a> &amp;user,</div>
<div class="line"><a name="l00110"></a><span class="lineno">  110</span>&#160;              std::vector&lt;double&gt; &amp;scalarProjections,</div>
<div class="line"><a name="l00111"></a><span class="lineno">  111</span>&#160;              std::vector&lt;<a class="code" href="class_tensor.html">Tensor&lt;1,dim,double&gt;</a> &gt; &amp;vectorProjections){};</div>
<div class="line"><a name="l00112"></a><span class="lineno">  112</span>&#160;</div>
<div class="line"><a name="l00113"></a><span class="lineno">  113</span>&#160;</div>
<div class="line"><a name="l00114"></a><span class="lineno">  114</span>&#160;<span class="preprocessor">#endif //defaultUserFunctions_h</span></div>
<div class="ttc" id="group__user_functions_html_gac3c9dadedbc328dc0a3006f072b08a55"><div class="ttname"><a href="group__user_functions.html#gac3c9dadedbc328dc0a3006f072b08a55">vectorInitialConditions</a></div><div class="ttdeci">Tensor&lt; 1, dim, double &gt; vectorInitialConditions(const Tensor&lt; 1, dim, double &gt; &amp;x, unsigned int vector_i, AppCtx&lt; dim &gt; &amp;user)</div><div class="ttdef"><b>Definition:</b> defaultUserFunctions.h:41</div></div>
<div class="ttc" id="solution_class_8h_html"><div class="ttname"><a href="solution_class_8h.html">solutionClass.h</a></div></div>
<div class="ttc" id="struct_app_ctx_html"><div class="ttname"><a href="struct_app_ctx.html">AppCtx</a></div><div class="ttdef"><b>Definition:</b> appCtx.h:18</div></div>
<div class="ttc" id="group__user_functions_html_ga4bb6b6363788ea6d3af2c543955ee029"><div class="ttname"><a href="group__user_functions.html#ga4bb6b6363788ea6d3af2c543955ee029">scalarInitialConditions</a></div><div class="ttdeci">double scalarInitialConditions(const Tensor&lt; 1, dim, double &gt; &amp;x, unsigned int scalar_i, AppCtx&lt; dim &gt; &amp;user)</div><div class="ttdef"><b>Definition:</b> defaultUserFunctions.h:28</div></div>
<div class="ttc" id="classsolution_scalars_html"><div class="ttname"><a href="classsolution_scalars.html">solutionScalars</a></div><div class="ttdef"><b>Definition:</b> solutionClass.h:11</div></div>
<div class="ttc" id="group__user_functions_html_ga31a2f2e526abaf0b8a00c2623e14f22e"><div class="ttname"><a href="group__user_functions.html#ga31a2f2e526abaf0b8a00c2623e14f22e">projectFields</a></div><div class="ttdeci">void projectFields(const Tensor&lt; 1, dim, double &gt; &amp;x, const Tensor&lt; 1, dim, double &gt; &amp;normal, const solutionScalars&lt; dim, double &gt; &amp;c, const solutionVectors&lt; dim, double &gt; &amp;u, AppCtx&lt; dim &gt; &amp;user, std::vector&lt; double &gt; &amp;scalarProjections, std::vector&lt; Tensor&lt; 1, dim, double &gt; &gt; &amp;vectorProjections)</div><div class="ttdef"><b>Definition:</b> defaultUserFunctions.h:105</div></div>
<div class="ttc" id="tensor_8h_html"><div class="ttname"><a href="tensor_8h.html">tensor.h</a></div></div>
<div class="ttc" id="test_function_class_8h_html"><div class="ttname"><a href="test_function_class_8h.html">testFunctionClass.h</a></div></div>
<div class="ttc" id="group__user_functions_html_ga397c8fb1bf91992fb38944806aa864cf"><div class="ttname"><a href="group__user_functions.html#ga397c8fb1bf91992fb38944806aa864cf">loadStep</a></div><div class="ttdeci">void loadStep(unsigned int step, AppCtx&lt; dim &gt; &amp;user)</div><div class="ttdef"><b>Definition:</b> defaultUserFunctions.h:71</div></div>
<div class="ttc" id="group__user_functions_html_gae605154e592215f58a1b4c68396db2d0"><div class="ttname"><a href="group__user_functions.html#gae605154e592215f58a1b4c68396db2d0">adaptiveTimeStep</a></div><div class="ttdeci">void adaptiveTimeStep(unsigned int step, AppCtx&lt; dim &gt; &amp;user)</div><div class="ttdef"><b>Definition:</b> defaultUserFunctions.h:81</div></div>
<div class="ttc" id="class_tensor_html"><div class="ttname"><a href="class_tensor.html">Tensor</a></div><div class="ttdef"><b>Definition:</b> tensor.h:10</div></div>
<div class="ttc" id="classsolution_vectors_html"><div class="ttname"><a href="classsolution_vectors.html">solutionVectors</a></div><div class="ttdef"><b>Definition:</b> solutionClass.h:221</div></div>
<div class="ttc" id="app_ctx_8h_html"><div class="ttname"><a href="app_ctx_8h.html">appCtx.h</a></div></div>
<div class="ttc" id="group__user_functions_html_gacaf804e621998c5c9794a46d3212afbb"><div class="ttname"><a href="group__user_functions.html#gacaf804e621998c5c9794a46d3212afbb">boundaryConditions</a></div><div class="ttdeci">void boundaryConditions(AppCtx&lt; dim &gt; &amp;user, double scale)</div><div class="ttdef"><b>Definition:</b> defaultUserFunctions.h:60</div></div>
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